It will work, but I would want to run the 5030-98 System which uses a longer line and larger can along with the pro Series Check Valve which will help with the vacuum and boost.
The whipple one comes with a CSS which I can build for you as well. I would just need the measurement of the line from the valve cover. Price would be the same.
Would be from the dricer side valve cover to the intake tube connection. The one they use looks like the stock line just moved over. This way I can verify with our system. If you would like, Shoot me a call. 561-588-6630.