Perhaps the factory peddle setting is off. With the car off(duh) put it in first and use your foot to lift up on the peddle from underneath. Then press down on the clutch. You should hear/feel a "pop" as it adjusts. This should lower the bite point.
Unless you are a Ford exec or have a controlling interest in a dealership, you are paying ADM. No dealer is going to sell their 1 GT500 at MSRP, period. You are either being lied to or doing the lying. I'm sorry but leaving $10-25k on the table is just bad business.